Results 81 to 90 of about 5,544 (121)

A structural analysis of in vitro catalytic activities of hammerhead ribozymes

open access: yesBMC Bioinformatics, 2007
Background Ribozymes are small catalytic RNAs that possess the dual functions of sequence-specific RNA recognition and site-specific cleavage. Trans-cleaving ribozymes can inhibit translation of genes at the messenger RNA (mRNA) level in both eukaryotic ...
Schneider Erasmus   +5 more
doaj   +1 more source

An Alternative Ribozyme for the RNA Hypercycle [PDF]

open access: yes, 2013
In the quest to forward understanding of the prebiotic world (specifically, the RNA World Hypothesis), one of the most interesting paradigms to consider is the potential for cooperative networks that may have driven molecular evolution forward.
Elkhal, Ishak
core   +1 more source

The structure and catalytic mechanism of a pseudoknot-containing hammerhead ribozyme

open access: yesNature Communications
We have determined the crystal structure of a pseudoknot (PK)-containing hammerhead ribozyme that closely resembles the pistol ribozyme, with essentially identical secondary structure and connectivity. The activity is more sensitive to deletion of the G8
Xuelin Zhan   +6 more
doaj   +1 more source

Ribozyme mediated destruction of RNA in vivo

open access: yes, 1989
Previous studies have demonstrated that high ribozyme to substrate ratios are required for ribozyme inhibitory function in nuclear extracts. To obtain high intracellular levels of ribozymes, tRNA genes, known to be highly expressed in most tissues, have ...
Cotten, M., Birnstiel, M.L.
core   +1 more source

Ribozymes based self-cleavage sgRNA and its application in gene editing

open access: yes四川大学学报. 自然科学版, 2019
Currently, sgRNAs are usually transcribed by type Ⅲ promoters in CRISPR/Cas9 system, which makes it difficult to achieve tissuespecific and timespecific expression. Cytotoxicity is an additional concern for constitutive transcription of small RNAs.
Shan Ce, Li Zhong-Han
doaj  

Folding and catalysis by the VS ribozyme

open access: yes, 2002
The VS ribozyme is a 154 nt self-cleaving RNA molecule that can be divided into a trans-acting five-helix ribozyme and stem-loop substrate. The structure of the ribozyme is organised by two three-way helical junctions, the structure of which has been ...
Norman, David G.   +2 more
core   +1 more source

Kinetic Mechanism of the Hairpin Ribozyme [PDF]

open access: yes, 1997
To investigate the relationship between RNA folding and ribozyme catalysis, we have carried out a detailed kinetic analysis of four structural derivatives of the hairpin ribozyme. Optimal and suboptimal (wild-type) substrate sequences were studied in
Banerjee, Aloke Raj   +2 more
core   +2 more sources

Short-term sequence evolution and vertical inheritance of the Naegleria twin-ribozyme group I intron

open access: yesBMC Evolutionary Biology, 2006
Background Ribosomal DNA of several species of the free-living Naegleria amoeba harbors an optional group I intron within the nuclear small subunit ribosomal RNA gene.
De Jonckheere Johan F   +3 more
doaj   +1 more source

Intracellular ribozyme applications

open access: yes, 2002
The exquisite target selectivity of trans -acting ribozymes has fostered their use as potential therapeutic agents and tools for down-regulating cellular transcripts. In living cells, free diffusion of RNAs is extremely limited, if it exists at all. Thus,
Michienzi, A   +7 more
core   +1 more source

The ubiquitous hammerhead ribozyme

open access: yes, 2012
The hammerhead ribozyme is a small catalytic RNA motif capable of endonucleolytic (self-) cleavage. It is composed of a catalytic core of conserved nucleotides flanked by three helices, two of which form essential tertiary interactions for fast self ...
De La Peña, Marcos   +4 more
core   +1 more source

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