Results 11 to 20 of about 4,574 (248)

Decoding subcellular RNA localization one molecule at a time

open access: yesGenome Biology
Eukaryotic cells are highly structured and composed of multiple membrane-bound and membraneless organelles. Subcellular RNA localization is a critical regulator of RNA function, influencing various biological processes.
Josep Biayna, Gabrijela Dumbović
doaj   +2 more sources

A computational framework to study sub-cellular RNA localization

open access: yesNature Communications, 2018
Automated analysis of RNA localisation in smFISH data has been elusive. Here, the authors simulate and use a large dataset of images to design and validate a framework for highly accurate classification of sub-cellular RNA localisation patterns from ...
Aubin Samacoits   +9 more
doaj   +2 more sources

EL-RMLocNet: An explainable LSTM network for RNA-associated multi-compartment localization prediction

open access: yesComputational and Structural Biotechnology Journal, 2022
Subcellular localization of Ribonucleic Acid (RNA) molecules provide significant insights into the functionality of RNAs and helps to explore their association with various diseases.
Muhammad Nabeel Asim   +7 more
doaj   +1 more source

Landscape and functions of RNA localization in the Drosophila follicular epithelium [PDF]

open access: yes, 2021
The mechanisms and roles underlying the phenomenon of RNA localization in differentiated tissues are poorly characterized. Drosophila follicular epithelium represents a good model to study RNA localization in the context of an adult tissue, for several ...
Cassella, Lucia
core   +1 more source

Quantitative analysis of subcellular distributions with an open-source, object-based tool

open access: yesBiology Open, 2020
The subcellular localization of objects, such as organelles, proteins, or other molecules, instructs cellular form and function. Understanding the underlying spatial relationships between objects through colocalization analysis of microscopy images is a ...
Pearl V. Ryder, Dorothy A. Lerit
doaj   +1 more source

RNA localization in bacteria [PDF]

open access: yesRNA Biology, 2014
One of the most important discoveries in the field of microbiology in the last two decades is that bacterial cells have intricate subcellular organization. This understanding has emerged mainly from the depiction of spatial and temporal organization of proteins in specific domains within bacterial cells, e.g., midcell, cell poles, membrane and ...
Avi-ad Avraam, Buskila   +2 more
openaire   +2 more sources

RNA Localization in Bacteria [PDF]

open access: yesMicrobiology Spectrum, 2018
ABSTRACT Diverse mechanisms and functions of posttranscriptional regulation by small regulatory RNAs and RNA-binding proteins have been described in bacteria. In contrast, little is known about the spatial organization of RNAs in bacterial cells.
Jingyi, Fei, Cynthia M, Sharma
openaire   +2 more sources

Multivalent interactions with RNA drive recruitment and dynamics in biomolecular condensates in Xenopus oocytes

open access: yesiScience, 2022
Summary: RNA localization and biomolecular condensate formation are key biological strategies for organizing the cytoplasm and generating cellular polarity. In Xenopus oocytes, RNAs required for germ layer patterning localize in biomolecular condensates,
Sarah E. Cabral   +2 more
doaj   +1 more source

Application of RNA subcellular fraction estimation method to explore RNA localization regulation

open access: yesG3: Genes, Genomes, Genetics, 2021
RNA localization is involved in multiple biological processes. Recent advances in subcellular fractionation-based sequencing approaches uncovered localization pattern on a global scale. Most of existing methods adopt relative localization ratios (such as
Xiaomin Dai   +8 more
doaj   +1 more source

Localization of RNA and translation in the mammalian oocyte and embryo. [PDF]

open access: yesPLoS ONE, 2018
The tight correlation between mRNA distribution and subsequent protein localization and function indicate a major role for mRNA localization within the cell.
Denisa Jansova   +4 more
doaj   +1 more source

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