Results 41 to 50 of about 70,987 (292)

Mechanochemical coupling and bi-phasic force-velocity dependence in the ultra-fast ring ATPase SpoIIIE

open access: yeseLife, 2018
Multi-subunit ring-shaped ATPases are molecular motors that harness chemical free energy to perform vital mechanical tasks such as polypeptide translocation, DNA unwinding, and chromosome segregation.
Ninning Liu   +3 more
doaj   +1 more source

A guide to small fluorescent probes for single-molecule biophysics

open access: yesChemical Physics Reviews, 2023
The explosive growth of single-molecule techniques is transforming our understanding of biology, helping to develop new physics inspired by emergent biological processes, and leading to emerging areas of nanotechnology. Key biological and chemical processes can now be probed with new levels of detail, one molecule at a time, from the nanoscopic ...
Leake, Mark Christian, Quinn, Steven
openaire   +2 more sources

Two-subunit DNA escort mechanism and inactive subunit bypass in an ultra-fast ring ATPase

open access: yeseLife, 2015
SpoIIIE is a homo-hexameric dsDNA translocase responsible for completing chromosome segregation in Bacillus subtilis. Here, we use a single-molecule approach to monitor SpoIIIE translocation when challenged with neutral-backbone DNA and non-hydrolyzable ...
Ninning Liu   +2 more
doaj   +1 more source

Focus on function: Single molecule RNA enzymology [PDF]

open access: yes, 2007
The ability of RNA to catalyze chemical reactions was first demonstrated 25 years ago with the discovery that group I introns and RNase P function as RNA enzymes (ribozymes).
Mark A. Ditzler   +7 more
core   +1 more source

Local-to-global signal transduction at the core of a Mn2+ sensing riboswitch

open access: yesNature Communications, 2019
Riboswitches bind intracellular metabolites and control bacterial gene expression. Here, by using X-ray crystallography, molecular dynamics simulations, and single-molecule fluorescence resonance energy transfer, the authors show how a local Mn2+ ion ...
Krishna C. Suddala   +8 more
doaj   +1 more source

Distribution bias and biochemical characterization of TOP1MT single nucleotide variants

open access: yesScientific Reports, 2017
Mitochondrial topoisomerase I (TOP1MT) is a type IB topoisomerase encoded in the nucleus of vertebrate cells. In contrast to the other five human topoisomerases, TOP1MT possesses two high frequency single nucleotide variants (SNVs), rs11544484 (V256I ...
Hongliang Zhang   +4 more
doaj   +1 more source

Homology sensing via non-linear amplification of sequence-dependent pausing by RecQ helicase

open access: yeseLife, 2019
RecQ helicases promote genomic stability through their unique ability to suppress illegitimate recombination and resolve recombination intermediates. These DNA structure-specific activities of RecQ helicases are mediated by the helicase-and-RNAseD like C-
Yeonee Seol   +3 more
doaj   +1 more source

Identification of binding mechanisms in single molecule-DNA complexes

open access: yes, 2003
Eckel R, Ros R, Ros A, Wilking SD, Sewald N, Anselmetti D. Identification of binding mechanisms in single molecule-DNA complexes. Biophysical journal. 2003;85(3):1968-1973.Changes in the elastic properties of single deoxyribonucleic acid (DNA) molecules ...
Anselmetti, Dario   +14 more
core   +1 more source

Single-molecule conductance of double-stranded RNA oligonucleotides

open access: yes, 2021
RNA oligonucleotides are crucial for a range of biological functions and in many biotechnological applications. Herein, we measured, for the first time, the conductance of individual double-stranded (ds)RNA molecules and compared it with the conductance ...
Evgenii, Kliuchnikov   +6 more
core   +1 more source

Transient pauses of the bacterial flagellar motor at low load

open access: yesNew Journal of Physics, 2016
The bacterial flagellar motor (BFM) is the molecular machine responsible for the swimming and chemotaxis of many species of motile bacteria. The BFM is bidirectional, and changes in the rotation direction of the motor are essential for chemotaxis. It has
A L Nord, F Pedaci, R M Berry
doaj   +1 more source

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