Results 21 to 30 of about 253,337 (321)
Tandem repeats finder: a program to analyze DNA sequences. [PDF]
Nucleic Acids Research, 1999 A tandem repeat in DNA is two or more contiguous, approximate copies of a pattern of nucleotides. Tandem repeats have been shown to cause human disease, may play a variety of regulatory and evolutionary roles and are important laboratory and analytic tools. Extensive knowledge about pattern size, copy number, mutational history, etc. for tandem repeats
Gary Benson
semanticscholar +3 more sources
Finding approximate tandem repeats in genomic sequences [PDF]
Proceedings of the eighth annual international conference on Computational molecular biology - RECOMB '04, 2004 An efficient algorithm is presented for detecting approximate tandem repeats in genomic sequences. The algorithm is based on a flexible statistical model which allows a wide range of definitions of approximate tandem repeats. The ideas and methods underlying the algorithm are described and its effectiveness on genomic data is demonstrated.
Ydo Wexler +3 more
openaire +2 more sources
Forensic Science International: Genetics, 2023 The DNA Commission of the International Society for Forensic Genetics (ISFG) has developed a set of nomenclature recommendations for short tandem repeat (STR) sequences.
K. Gettings +19 more
semanticscholar +1 more source
IMPACT OF TANDEM REPEATS ON THE SCALING OF NUCLEOTIDE SEQUENCES [PDF]
International Journal of Bifurcation and Chaos, 2006 Techniques such as detrended fluctuation analysis (DFA) and its extensions have been widely used to determine the nature of scaling in nucleotide sequences. In this brief communication we show that tandem repeats which are ubiquitous in nucleotide sequences can prevent reliable estimation of possible long-range correlations. Therefore, it is important
Radhakrishnan Nagarajan +1 more
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Assembly and Characterization of the Mitochondrial Genome of Fallopia aubertii (L. Henry) Holub
Frontiers in Bioscience-Landmark, 2023 Background: Fallopia aubertii (L. Henry) Holub is a perennial semi-shrub with both ornamental and medicinal value. The mitochondrial genomes of plants contain valuable genetic traits that can be utilized for the exploitation of genetic resources.
Xin Zhang, Yong-Chang Lu, Jiu-Li Wang
doaj +1 more source
Locating tandem repeats in weighted sequences in proteins [PDF]
BMC Bioinformatics, 2013 Abstract A weighted biological sequence is a string in which a set of characters may appear at each position with respective probabilities of occurrence. We attempt to locate all the tandem repeats in a weighted sequence. A repeated substring is called a tandem repeat if each occurrence of the substring is directly adjacent to each other.
Zhang, Hui +2 more
openaire +4 more sources
Patterns of de novo tandem repeat mutations and their role in autism
Nature, 2021 Autism spectrum disorder (ASD) is an early-onset developmental disorder characterized by deficits in communication and social interaction and restrictive or repetitive behaviours1,2.
Ileena Mitra +8 more
semanticscholar +1 more source
The Singular Evolution of Olea Genome Structure
Frontiers in Plant Science, 2022 The current view of plant genome evolution proposes that genome size has mainly been determined by polyploidisation and amplification/loss of transposons, with a minor role played by other repeated sequences, such as tandem repeats.
Flavia Mascagni +9 more
doaj +1 more source