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HPTAD: A Computational Method to Identify Topologically Associating Domains From HiChIP and PLAC-Seq Datasets [PDF]
Computational and Structural Biotechnology Journal, 2023 High-throughput chromatin conformation capture technologies, such as Hi-C and Micro-C, have enabled genome-wide view of chromatin spatial organization.
Armen Abnousi, Jia Wen
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Methods for the Analysis of Topologically Associating Domains (TADs)
Methods in Molecular Biology, 2022Daniele Tavernari +2 more
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Topologically Associating Domains and Regulatory Landscapes in Development, Evolution and Disease
Frontiers in Cell and Developmental Biology, 2021Juan J Tena, José M Santos-Pereira
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Emerging Regulatory Mechanisms of Noncoding RNAs in Topologically Associating Domains
Trends in Genetics, 2023Vinay Tergaonkar, Melissa J Fullwood
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A Comparison of Topologically Associating Domain Callers Based on Hi-C Data
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2023Jun Wang, Yaohang Li, Jianxin Wang
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Structure, Function and Evolution of Topologically Associating Domains (TADs) atHOX Loci
FEBS Letters, 2015Denis Duboule
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Breaking TADs: How Alterations of Chromatin Domains Result in Disease
Trends in Genetics, 2016Malte Spielmann +2 more
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Structural and Functional Diversity of Topologically Associating Domains
FEBS Letters, 2015Job Dekker, Edith Heard
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