Results 31 to 40 of about 186,280 (286)

Cytomolecular identification of individual wheat-wheat chromosome arm associations in wheat-rye hybrids [PDF]

, 2013
Chromosome pairing in the meiotic metaphase I of wheatrye hybrids has been characterized by sequential genomic and fluorescent in situ hybridization allowing not only the discrimination of wheat and rye chromosomes, but also the identification of the
Badaeva ED, Badaeva ED, Bass HW, Bedbrook J, Berkman PJ, Cifuentes M, Cifuentes M, Cifuentes M, Colas I, Conley EJ, Contento A, Cuadrado A, Devos KM, Devos KM, Fedak G, Fernandez-Kalvin B, Ferrer E, Fominaya A, Gale MD, Gerlach WL, Gill BS, Hernandez P, Huang S, I. Molnár, Jauhar PP, Kamstra SA, Le HT, Logojan A, Lukaszewski AJ, M. Megyeri, M. Molnár-Láng, Martinez-Perez E, Martinez-Perez E, Miller TE, Molnár I, Molnár I, Molnár I, Molnár I, Molnár-Láng M, Molnár-Láng M, Mukai Y, Munkvold JD, Nagaki K, Naranjo T, Naranjo T, Naranjo T, Prieto P, Qi L, Riley R, Riley R, Sabot F, Schwarzacher T, Sepsi A, Sharp PJ, Szakács, Sánchez-Morán E, Tischner T   +56 more
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Large-scale reconstruction of 3D structures of human chromosomes from chromosomal contact data

Nucleic Acids Research, 2014
Abstract Chromosomes are not positioned randomly within a nucleus, but instead, they adopt preferred spatial conformations to facilitate necessary long-range gene–gene interactions and regulations. Thus, obtaining the 3D shape of chromosomes of a genome is critical for understanding how the genome folds, functions and how its genes ...
Trieu, Tuan, Cheng, Jianlin
openaire   +2 more sources

Inferring chromosome radial organization from Hi-C data

BMC Bioinformatics, 2020
Background The nonrandom radial organization of eukaryotic chromosome territories (CTs) inside the nucleus plays an important role in nuclear functional compartmentalization. Increasingly, chromosome conformation capture (Hi-C) based approaches are being
Priyojit Das, Tongye Shen, Rachel Patton McCord   +2 more
doaj   +1 more source

Contrasting roles of condensin I and condensin II in mitotic chromosome formation [PDF]

, 2012
© 2012. Published by The Company of Biologists LtdIn vertebrates, two condensin complexes exist, condensin I and condensin II, which have differing but unresolved roles in organizing mitotic chromosomes.
Abe, Adams, Adolph, Anderson, Baron, Baumann, Belmont, Bernad, Buerstedde, Chan, Cooke, Csankovszki, Csankovszki, D'Ambrosio, Dej, Earnshaw, Earnshaw, Fazzio, Fedorov, Gasser, Gerlich, Gossen, Graumann, Gustafsson, Hagstrom, Hilwig, Hirano, Hirano, Hirano, Hirota, Hudson, Hudson, Hudson, Jaqaman, Kelly, Kireeva, Kurasawa, Lipp, Maeshima, Markaki, Moser, Murnion, Ohta, Oliveira, Ono, Ono, Paulson, Pertile, Ribeiro, Ruchaud, Saitoh, Samejima, Samoshkin, Savvidou, Shintomi, Siddiqui, Spence, Stear, Strukov, Strunnikov, Takemoto, Vagnarelli, Volkov, Wang, Wang, Watrin, Wignall, Yamagishi, Yanagida, Yoshimura   +69 more
core   +2 more sources

Calculation of 3D genome structures for comparison of chromosome conformation capture experiments with microscopy: An evaluation of single-cell Hi-C protocols. [PDF]

, 2018
Single-cell chromosome conformation capture approaches are revealing the extent of cell-to-cell variability in the organization and packaging of genomes.
Basu, Srinjan, Lando, David, Laue, Ernest D, Stevens, Tim J   +3 more
core   +2 more sources

Manifold Based Optimization for Single-Cell 3D Genome Reconstruction. [PDF]

PLoS Computational Biology, 2015
The three-dimensional (3D) structure of the genome is important for orchestration of gene expression and cell differentiation. While mapping genomes in 3D has for a long time been elusive, recent adaptations of high-throughput sequencing to chromosome ...
Jonas Paulsen, Odin Gramstad, Philippe Collas   +2 more
doaj   +1 more source

Motion and disparity estimation with self adapted evolutionary strategy in 3D video coding [PDF]

, 2007
Real world information, obtained by humans is three dimensional (3-D). In experimental user-trials, subjective assessments have clearly demonstrated the increased impact of 3-D pictures compared to conventional flat-picture techniques. It is reasonable,
Adedoyin, S, Aggoun, A, Fernando, WAC, Kondoz, KM   +3 more
core   +1 more source

Characterizing the 3D structure and dynamics of chromosomes and proteins in a common contact matrix framework [PDF]

Nucleic Acids Research, 2018
Abstract Any conformational ensemble of biopolymers, whether they are proteins or chromosomes, can be described using contact matrices derived from experimental or computational studies. One powerful approach to extract meaningful information from these contact matrices is to perform principal component analysis (PCA) on the covariance ...
Lindsay, Richard J., Pham, Bill, Shen, Tongye, McCord, Rachel Patton   +3 more
openaire   +2 more sources

Inter- and intra-specific gene-density-correlated radial chromosome territory arrangements are conserved in Old World monkeys [PDF]

, 2005
Recently it has been shown that the gene-density correlated radial distribution of human 18 and 19 homologous chromosome territories (CTs) is conserved in higher primates in spite of chromosomal rearrangements that occurred during evolution.
ISHIDA Takafumi, KüPPER Katrin, MIZUSAWA Hiroshi, NEUSSER Michaela, TANABE Hideyuki, 秀之 田辺　   +5 more
core   +1 more source

The 3D Genome Browser: A web-based browser for visualizing 3D genome organization and long-range chromatin interactions [PDF]

, 2018
Here, we introduce the 3D Genome Browser, http://3dgenome.org, which allows users to conveniently explore both their own and over 300 publicly available chromatin interaction data of different types.
Choudhary, Mayank N.K., Hardison, Ross, Hu, Ming, Kuang, Da, Li, Daofeng, Li, Yun, Song, Fan, Wang, Ting, Wang, Yanli, Xu, Jie, Yue, Feng, Zhang, Bo, Zhang, Lijun   +12 more
core   +2 more sources