Results 11 to 20 of about 68,994 (256)

Heparanase Modulates Chromatin Accessibility

open access: yesCells, 2023
Heparanase is the sole endoglucuronidase that degrades heparan sulfate in the cell surface and extracellular matrix (ECM). Several studies have reported the localization of heparanase in the cell nucleus, but the functional role of the nuclear enzyme is ...
Honglian Li   +7 more
doaj   +4 more sources

Chromatin accessibility landscapes define stromal cell identities across tissues [PDF]

open access: yesCommunications Biology
Chromatin accessibility is crucial in regulating gene expression and maintaining cellular identity. While single-cell RNA sequencing has revolutionized transcriptomic profiling, the understanding of chromatin dynamics across diverse tissues remains ...
Amin Nooranikhojasteh   +6 more
doaj   +2 more sources

Spatially mapped single-cell chromatin accessibility [PDF]

open access: yesNature Communications, 2021
Spatial orientation of cells in an interconnected network is lost in high-throughput single-cell epigenomic assays. Here the authors present sciMAP-ATAC to produce spatially resolved single-cell ATAC-seq data.
Casey A. Thornton   +12 more
doaj   +4 more sources

DNase I Chromatin Accessibility Analysis [PDF]

open access: yesBio-Protocol, 2019
Chromatin consists of compacted DNA in complex with proteins and contributes to the organization of DNA and its stability. Furthermore, chromatin plays key roles in regulating cellular processes such as DNA replication, transcription, DNA repair, and ...
Brook Nepon-Sixt, Mark Alexandrow
doaj   +3 more sources

Genome-Wide Association between Transcription Factor Expression and Chromatin Accessibility Reveals Regulators of Chromatin Accessibility. [PDF]

open access: yesPLoS Computational Biology, 2017
To better understand genome regulation, it is important to uncover the role of transcription factors in the process of chromatin structure establishment and maintenance.
David Lamparter   +4 more
doaj   +6 more sources

Profiling Chromatin Accessibility at Single-cell Resolution

open access: yesGenomics, Proteomics & Bioinformatics, 2021
How distinct transcriptional programs are enacted to generate cellular heterogeneity and plasticity, and enable complex fate decisions are important open questions.
Sarthak Sinha   +8 more
doaj   +3 more sources

Chromatin Accessibility in Cancer: Biological Functions, Mechanisms, Therapeutic Potential, and Future Directions [PDF]

open access: yesMedComm
Cancer remains a major therapeutic challenge owing to its complex pathogenesis and the limitations of current treatments, such as poor specificity, toxicity, and multidrug resistance.
Wentao Xia   +4 more
doaj   +2 more sources

The Chromatin Accessibility Landscape of Adult Rat [PDF]

open access: yesFrontiers in Genetics, 2021
Yue Yuan   +34 more
doaj   +3 more sources

Regulation of chromatin accessibility by hypoxia and HIF [PDF]

open access: yesBiochemical Journal, 2022
Reduced oxygen availability (hypoxia) can act as a signalling cue in physiological processes such as development, but also in pathological conditions such as cancer or ischaemic disease. As such, understanding how cells and organisms respond to hypoxia is of great importance.
Michael Batie   +3 more
openaire   +3 more sources

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