Results 11 to 20 of about 2,923 (177)

Environmental epitranscriptomics [PDF]

open access: yesEnvironmental Research, 2020
Chemical modifications of RNA molecules have gained increasing attention since evidence emerged for their substantive roles in a range of biological processes, such as the stability and translation of mRNA transcripts. More than 150 modifications have been identified in different organisms to date, collectively known as the 'epitranscriptome', with 6 ...
Cayir, Akin   +2 more
openaire   +4 more sources

Epitranscriptomic profile of Lactobacillus agilis and its adaptation to growth on inulin

open access: yesBMC Research Notes, 2021
Objective Ribonucleic acids (RNA) are involved in many cellular functions. In general, RNA is made up by only four different ribonucleotides. The modifications of RNA (epitranscriptome) can greatly enhance the structural diversity of RNA, which in turn ...
Hongzhou Wang   +6 more
doaj   +1 more source

Recent advances in the plant epitranscriptome

open access: yesGenome Biology, 2023
Chemical modifications of RNAs, known as the epitranscriptome, are emerging as widespread regulatory mechanisms underlying gene regulation. The field of epitranscriptomics advances recently due to improved transcriptome-wide sequencing strategies for ...
Lisha Shen   +4 more
doaj   +1 more source

DPred_3S: identifying dihydrouridine (D) modification on three species epitranscriptome based on multiple sequence-derived features

open access: yesFrontiers in Genetics, 2023
Introduction: Dihydrouridine (D) is a conserved modification of tRNA among all three life domains. D modification enhances the flexibility of a single nucleotide base in the spatial structure and is disease- and evolution-associated.
Jinjin Ren   +6 more
doaj   +1 more source

Translating the epitranscriptome [PDF]

open access: yesWIREs RNA, 2016
RNAmodifications are indispensable for the translation machinery to provide accurate and efficient protein synthesis. Whereas the importance of transfer RNA (tRNA) and ribosomal RNA (rRNA) modifications has been well described and is unquestioned for decades, the significance of internal messenger RNA (mRNA) modifications has only recently been ...
Hoernes, Thomas Philipp   +1 more
openaire   +2 more sources

Viral Epitranscriptomics [PDF]

open access: yesJournal of Virology, 2017
ABSTRACT Although it has been known for over 40 years that eukaryotic mRNAs bear internal base modifications, it is only in the last 5 years that the importance of these modifications has begun to come into focus. The most common mRNA modification, the addition of a methyl group to the N 6 ...
Edward M, Kennedy   +3 more
openaire   +2 more sources

Epitranscriptome changes triggered by ammonium nutrition regulate the proteome response of maritime pine roots

open access: yesFrontiers in Plant Science, 2022
Epitranscriptome constitutes a gene expression checkpoint in all living organisms. Nitrogen is an essential element for plant growth and development that influences gene expression at different levels such as epigenome, transcriptome, proteome, and ...
Francisco Ortigosa   +6 more
doaj   +1 more source

Refined RIP-seq protocol for epitranscriptome analysis with low input materials. [PDF]

open access: yesPLoS Biology, 2018
N6-Methyladenosine (m6A) accounts for approximately 0.2% to 0.6% of all adenosine in mammalian mRNA, representing the most abundant internal mRNA modifications.
Yong Zeng   +11 more
doaj   +1 more source

The Epitranscriptome and Innate Immunity [PDF]

open access: yesPLOS Genetics, 2015
Our knowledge of the variety and abundances of RNA base modifications is rapidly increasing. Modified bases have critical roles in tRNAs, rRNAs, translation, splicing, RNA interference, and other RNA processes, and are now increasingly detected in all types of transcripts.
O'Connell, Mary   +2 more
openaire   +4 more sources

Cancer epitranscriptomics in a nutshell [PDF]

open access: yesCurrent Opinion in Genetics & Development, 2022
Remarkable technological progress has led to breakthrough discoveries in epitranscriptomics, reshaping our understanding of modifications decorating RNA. The past decade has seen a tremendous endeavor to describe the nature, functions, and biological roles of messenger RNA (mRNA) modifications, positioning epitranscriptomics as a crucial pillar in ...
Primac, Irina   +2 more
openaire   +2 more sources

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