Results 31 to 40 of about 56,079,681 (305)

cnvCapSeq: detecting copy number variation in long-range targeted resequencing data. [PDF]

, 2014
Targeted resequencing technologies have allowed for efficient and cost-effective detection of genomic variants in specific regions of interest. Although capture sequencing has been primarily used for investigating single nucleotide variants and indels ...
Bellos, Evangelos; https://orcid.org/, Bellos, Evangelos, Kumar, Vikrant, Cheng, C-Y, Cheng, CY, Wong, TYI, Davila, S, Bellos, E, Phua, ZYA, Maggi, Jordi; https://orcid.org/, Lin, C, Phua, Zai Yang, Coin, Lachlan J M, Coin, LJM, Hibberd, ML, Hibberd, Martin L., Wong, TY, Cheng, Ching-Yu, Gemmy Cheung, CM, Cheung, CMIG, Coin, Lachlan JM, Yang Phua, Z, Lin, Clarabelle, Maggi, Jordi, Kumar, V, Cheng, Ching Yu, Maggi, J, Hibberd, Martin L, Coin, Lachlan J.M., Cheung, Chui Ming Gemmy, Davila, Sonia, Wong, Tien Yin   +31 more
core   +1 more source

CTAB DNA Extraction and Genotyping-by-Sequencing to Map Meiotic Crossovers in Plants

, 2022
Reciprocal DNA crossovers between chromosomes form new allelic combinations and contribute to the formation of novel genetic diversity. Crossovers are formed during meiosis of germ cells and these recombination events have influenced plant genome ...
Lambing, C.
core   +1 more source

Genetic diversity and population structure analysis of barley landraces from Shanghai region using genotyping-by-sequencing [PDF]

, 2023
Barley (Hordeum vulgare L.) is an important economic crop for food, feed and industrial raw materials. In the present research, 112 barley landraces from the Shanghai region were genotyped using genotyping-by-sequencing (GBS), and the genetic diversity ...
Huihui Wang, Chen, Z., Zong, Y., Halford, N. G., Yingjie Zong, Ruiju Lu, Wang, H., Lu, R., Zhiwei Chen, Chenghong Liu, Luli Li, Guo, Z., Liu, C., Nigel G. Halford, Li, L., Zhenzhu Guo   +15 more
core   +1 more source

tGBS® genotyping-by-sequencing enables reliable genotyping of heterozygous loci [PDF]

Nucleic Acids Research, 2017
Conventional genotyping-by-sequencing (cGBS) strategies suffer from high rates of missing data and genotyping errors, particularly at heterozygous sites. tGBS® genotyping-by-sequencing is a novel method of genome reduction that employs two restriction enzymes to generate overhangs in opposite orientations to which (single-strand) oligos rather than ...
Ott, Alina, Liu, Sanzhen, Schnable, James C., Yeh, Cheng-Ting 'Eddy', Wang, Kai-Sin, Schnable, Patrick S.   +5 more
openaire   +2 more sources

A single-nucleotide-polymorphism real-time PCR assay for genotyping of mycobacterium tuberculosis complex in peri-urban Kampala [PDF]

, 2015
Accurate and high-throughput genotyping of Mycobacterium tuberculosis complex (MTBC) may be important for understanding the epidemiology and pathogenesis of tuberculosis (TB).
Eddie M. Wampande, Kathleen Eisenach, Mary Nsereko, Stavroula K. Hatzios, Wampande, Eddie M., Hatzios, Stavroula K., Mayanja, Harriet K., Mupere, Ezekiel, Gagneux, Sebastien, Eisenach, Kathleen, Joloba, Moses L., Moses L. Joloba, Achan, Beatrice, Ezekiel Mupere, Nsereko, Mary, Sebastien Gagneux, Harriet K. Mayanja, null null, Boom, W Henry, Boom, W. Henry, W Henry Boom, Tuberculosis Research Unit,, Beatrice Achan   +22 more
core   +2 more sources

Distribution of genotype network sizes in sequence-to-structure genotype–phenotype maps [PDF]

Journal of The Royal Society Interface, 2017
An essential quantity to ensure evolvability of populations is the navigability of the genotype space. Navigability, understood as the ease with which alternative phenotypes are reached, relies on the existence of sufficiently large and mutually attainable genotype networks. The size of genotype networks (e.g. the number of RNA sequences folding into a
Susanna Manrubia, José A. Cuesta
openaire   +3 more sources

An Integrated Genotyping‐by‐Sequencing Polymorphism Map for Over 10,000 Sorghum Genotypes [PDF]

The Plant Genome, 2019
Mining crop genomic variation can facilitate the genetic research of complex traits and molecular breeding. In sorghum [ Sorghum bicolor L. (Moench)], several large‐scale single nucleotide polymorphism (SNP) datasets have been generated using ...
Zhenbin Hu, Marcus O. Olatoye, Sandeep Marla, Geoffrey P. Morris   +3 more
openaire   +3 more sources

Trait Analysis in Domestic Rabbits (Oryctolagus cuniculus f. domesticus) Using SNP Markers from Genotyping-by-Sequencing Data

Animals, 2022
The domestic rabbit (Oryctolagus cuniculus f. domesticus) is a very important variety in biomedical research and agricultural animal breeding.
Congyan Li, Yuying Li, Jie Zheng, Zhiqiang Guo, Xiuli Mei, Min Lei, Yongjun Ren, Xiangyu Zhang, Cuixia Zhang, Chao Yang, Li Tang, Yang Ji, Rui Yang, Jifeng Yu, Xiaohong Xie, Liangde Kuang   +15 more
doaj   +1 more source

Detection of Hub QTLs Underlying the Genetic Basis of Three Modules Covering Nine Agronomic Traits in an F₂ Soybean Population

Agronomy, 2022
Deciphering the genetic basis underlying agronomic traits is of importance for soybean improvement. However, covariation, modulated by genetic correlations between complicated traits via hub QTLs, commonly affects the efficiency and accuracy of soybean ...
Mengmeng Fu, Bo Qi, Shuguang Li, Haifeng Xu, Yaqi Wang, Zhixin Zhao, Xiwen Yu, Liyuan Pan, Jiayin Yang   +8 more
doaj   +1 more source

The development of a porcine 50K SNP panel using genotyping by target sequencing and its application

Journal of Integrative Agriculture
Genotyping by target sequencing (GBTS) integrates the advantages of silicon-based technology (high stability and reliability) and genotyping by sequencing (high flexibility and cost-effectiveness). However, GBTS panels are not currently available in pigs.
Zipeng Zhang, Siyuan Xing, Ao Qiu, Ning Zhang, Wenwen Wang, Changsong Qian, Jia’nan Zhang, Chuduan Wang, Qin Zhang, Xiangdong Ding   +9 more
doaj   +1 more source