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Genotyping-by-Sequencing in Plants
Biology, 2012 The advent of next-generation DNA sequencing (NGS) technologies has led to the development of rapid genome-wide Single Nucleotide Polymorphism (SNP) detection applications in various plant species.
Stéphane Deschamps +2 more
exaly +3 more sources
Identification of Candidate Genes for Pigmentation in Camels Using Genotyping-by-Sequencing
Animals, 2022 The coat color of dromedary is usually uniform and varies from black to white, although dark- to light-brown colors are the most common phenotypes. This project was designed to gain knowledge on novel color-related variants using genotyping-by-sequencing
Morteza Bitaraf Sani, Asim Faraz
exaly +3 more sources
Genomic Prediction in Tetraploid Ryegrass Using Allele Frequencies Based on Genotyping by Sequencing
Frontiers in Plant Science, 2018 Perennial ryegrass is an outbreeding forage species and is one of the most widely used forage grasses in temperate regions. The aim of this study was to investigate the possibility of implementing genomic prediction in tetraploid perennial ryegrass, to ...
Xiangyu Guo, Ingo Lenk, Just Jensen
exaly +3 more sources
Agronomy, 2021 Rapeseed is the most important oil crop used in the food and biodiesel industries. In this study, based on single nucleotide polymorphism (SNP) identified from genotyping-by-sequencing (GBS), and an association study of flowering time, crude fat and ...
Jaihyunk Ryu +11 more
doaj +1 more source
omicR: A tool to facilitate BLASTn alignments for sequence data
SoftwareX, 2021 Bioinformatics tools for the analysis of sequencing data, are becoming accessible for most scientists. Beginners who are unfamiliar to these tools can be overwhelmed when learning to handle large sequencing datasets.
Berenice Talamantes-Becerra +2 more
doaj +1 more source
Genotyping by Sequencing Advancements in Barley
Frontiers in Plant Science, 2022 Barley is considered an ideal crop to study cereal genetics due to its close relationship with wheat and diploid ancestral genome. It plays a crucial role in reducing risks to global food security posed by climate change. Genetic variations in the traits
Nirmal Raj Rajendran +2 more
doaj +1 more source
NanoGBS: A Miniaturized Procedure for GBS Library Preparation
Frontiers in Genetics, 2020 High-throughput reduced-representation sequencing (RRS)-based genotyping methods, such as genotyping-by-sequencing (GBS), have provided attractive genotyping solutions in numerous species.
Davoud Torkamaneh +7 more
doaj +1 more source
New Genotypes and Genomic Regions for Resistance to Wheat Blast in South Asian Germplasm
Plants, 2021 Wheat blast (WB) disease, since its first identification in Bangladesh in 2016, is now an established serious threat to wheat production in South Asia. There is a need for sound knowledge about resistance sources and associated genomic regions to assist ...
Chandan Roy +10 more
doaj +1 more source
Oil Crop Science, 2020 Broomrape (Orobanche cumana) is one of the most important parasitic plants that drastically reduces sunflower yield. The majority of existing resistance varieties have become insufficient for crop protection. Breeding for broomrape resistance is regarded
Shengli Liu +3 more
doaj +1 more source
Genotyping-by-sequencing enables linkage mapping in three octoploid cultivated strawberry families [PDF]
PeerJ, 2017 Genotyping-by-sequencing (GBS) was used to survey genome-wide single-nucleotide polymorphisms (SNPs) in three biparental strawberry (Fragaria × ananassa) populations with the goal of evaluating this technique in a species with a complex octoploid genome.
Kelly J. Vining +6 more
doaj +2 more sources