Results 11 to 20 of about 241,454 (288)
Adapting Genotyping-by-Sequencing for Rice F2 Populations
G3: Genes, Genomes, Genetics, 2017 Rapid and cost-effective genotyping of large mapping populations can be achieved by sequencing a reduced representation of the genome of every individual in a given population, and using that information to generate genetic markers.
Tomoyuki Furuta +4 more
doaj +3 more sources
Construction of relatedness matrices using genotyping-by-sequencing data [PDF]
BMC Genomics, 2015 Abstract Background Genotyping-by-sequencing (GBS) is becoming an attractive alternative to array-based methods for genotyping individuals for a large number of single nucleotide polymorphisms (SNPs).
Dodds, Ken G +6 more
openaire +3 more sources
The power of retrotransposons in high-throughput genotyping and sequencing. [PDF]
Front Plant Sci, 2023 The use of molecular markers has become an essential part of molecular genetics through their application in numerous fields, which includes identification of genes associated with targeted traits, operation of backcrossing programs, modern plant breeding, genetic characterization, and marker-assisted selection.
Arvas YE, Marakli S, Kaya Y, Kalendar R.
europepmc +6 more sources
Agronomy, 2021 Rapeseed is the most important oil crop used in the food and biodiesel industries. In this study, based on single nucleotide polymorphism (SNP) identified from genotyping-by-sequencing (GBS), and an association study of flowering time, crude fat and ...
Jaihyunk Ryu +11 more
doaj +1 more source
omicR: A tool to facilitate BLASTn alignments for sequence data
SoftwareX, 2021 Bioinformatics tools for the analysis of sequencing data, are becoming accessible for most scientists. Beginners who are unfamiliar to these tools can be overwhelmed when learning to handle large sequencing datasets.
Berenice Talamantes-Becerra +2 more
doaj +1 more source
NanoGBS: A Miniaturized Procedure for GBS Library Preparation
Frontiers in Genetics, 2020 High-throughput reduced-representation sequencing (RRS)-based genotyping methods, such as genotyping-by-sequencing (GBS), have provided attractive genotyping solutions in numerous species.
Davoud Torkamaneh +7 more
doaj +1 more source
New Genotypes and Genomic Regions for Resistance to Wheat Blast in South Asian Germplasm
Plants, 2021 Wheat blast (WB) disease, since its first identification in Bangladesh in 2016, is now an established serious threat to wheat production in South Asia. There is a need for sound knowledge about resistance sources and associated genomic regions to assist ...
Chandan Roy +10 more
doaj +1 more source
Genotyping-by-sequencing enables linkage mapping in three octoploid cultivated strawberry families [PDF]
PeerJ, 2017 Genotyping-by-sequencing (GBS) was used to survey genome-wide single-nucleotide polymorphisms (SNPs) in three biparental strawberry (Fragaria × ananassa) populations with the goal of evaluating this technique in a species with a complex octoploid genome.
Kelly J. Vining +6 more
doaj +2 more sources
Oil Crop Science, 2020 Broomrape (Orobanche cumana) is one of the most important parasitic plants that drastically reduces sunflower yield. The majority of existing resistance varieties have become insufficient for crop protection. Breeding for broomrape resistance is regarded
Shengli Liu +3 more
doaj +1 more source
Characterization of the USDA Cucurbita pepo, C. moschata, and C. maxima germplasm collections
Frontiers in Plant Science, 2023 The Cucurbita genus is home to a number of economically and culturally important species. We present the analysis of genotype data generated through genotyping-by-sequencing of the USDA germplasm collections of Cucurbita pepo, C. moschata, and C. maxima.
Christopher O. Hernandez +8 more
doaj +1 more source