Results 11 to 20 of about 179,331 (298)
Genotyping‐by‐sequencing in ecological and conservation genomics [PDF]
Molecular Ecology, 2013 The fields of ecological and conservation genetics have developed greatly in recent decades through the use of molecular markers to investigate organisms in their natural habitat and to evaluate the effect of anthropogenic disturbances. However, many of these studies have been limited to narrow regions of the genome, allowing for limited inferences but
Shawn R Narum +2 more
exaly +3 more sources
Adapting Genotyping-by-Sequencing and Variant Calling for Heterogeneous Stock Rats [PDF]
G3: Genes, Genomes, Genetics, 2020 The heterogeneous stock (HS) is an outbred rat population derived from eight inbred rat strains. HS rats are ideally suited for genome wide association studies; however, only a few genotyping microarrays have ever been designed for rats and none of them ...
Alexander F. Gileta +6 more
doaj +7 more sources
Adapting Genotyping-by-Sequencing for Rice F2 Populations
G3: Genes, Genomes, Genetics, 2017 Rapid and cost-effective genotyping of large mapping populations can be achieved by sequencing a reduced representation of the genome of every individual in a given population, and using that information to generate genetic markers.
Tomoyuki Furuta +4 more
doaj +3 more sources
Genotyping-by-sequencing performance in selected livestock species
Genomics, 2019 Application of next generation sequencing for large scale genotyping in livestock is limited by high costs and challenging data analysis process. However, available restriction enzyme-based enrichment techniques like e.g. genotyping-by-sequencing (GBS) are promising tools allowing reduction of financial outlies by a high sample multiplexing and ...
Artur Gurgul +2 more
exaly +3 more sources
Genotyping-by-Sequencing for Plant Breeding and Genetics
The Plant Genome, 2012 Rapid advances in “next-generation” DNA sequencing technology have brought the US$1000 human () genome within reach while providing the raw sequencing output for researchers to revolutionize the way populations are genotyped.
Jesse A. Poland, Trevor W. Rife
doaj +2 more sources
Genomic Prediction in Maize Breeding Populations with Genotyping-by-Sequencing [PDF]
G3: Genes, Genomes, Genetics, 2013 Abstract Genotyping-by-sequencing (GBS) technologies have proven capacity for delivering large numbers of marker genotypes with potentially less ascertainment bias than standard single nucleotide polymorphism (SNP) arrays. Therefore, GBS has become an attractive alternative technology for genomic selection.
Jose Crossa +2 more
exaly +4 more sources
Agronomy, 2021 Rapeseed is the most important oil crop used in the food and biodiesel industries. In this study, based on single nucleotide polymorphism (SNP) identified from genotyping-by-sequencing (GBS), and an association study of flowering time, crude fat and ...
Jaihyunk Ryu +11 more
doaj +1 more source
omicR: A tool to facilitate BLASTn alignments for sequence data
SoftwareX, 2021 Bioinformatics tools for the analysis of sequencing data, are becoming accessible for most scientists. Beginners who are unfamiliar to these tools can be overwhelmed when learning to handle large sequencing datasets.
Berenice Talamantes-Becerra +2 more
doaj +1 more source
Genotyping‐by‐sequencing for biogeography
Journal of Biogeography, 2022 AbstractAimGenotyping‐by‐sequencing (GBS) and similar reduced‐representation sequencing methods, such as restriction site‐associated DNA sequencing (RADseq), have been revolutionary for genetic analyses in biogeography. However, navigating the many different methodological and analytical approaches and numerous sources of potential error can be ...
Felix Vaux +3 more
openaire +1 more source
NanoGBS: A Miniaturized Procedure for GBS Library Preparation
Frontiers in Genetics, 2020 High-throughput reduced-representation sequencing (RRS)-based genotyping methods, such as genotyping-by-sequencing (GBS), have provided attractive genotyping solutions in numerous species.
Davoud Torkamaneh +7 more
doaj +1 more source