Results 21 to 30 of about 55,908,906 (258)

An evaluation of genotyping by sequencing (GBS) to map the Breviaristatum-e (ari-e) locus in cultivated barley [PDF]

, 2014
We explored the use of genotyping by sequencing (GBS) on a recombinant inbred line population (GPMx) derived from a cross between the two-rowed barley cultivar 'Golden Promise' (ari-e.GP/Vrs1) and the six-rowed cultivar 'Morex' (Ari-e/vrs1) to map plant ...
Arnis Druka, Jesse Poland, Micha Bayer, Robbie Waugh, Bayer, Micha, Pete E Hedley, Hui Liu, Druka, Arnis, Hackett, Christine A., Luke Ramsay, Ramsay, Luke, Poland, Jesse, Christine A Hackett, Liu, Hui, Hedley, Pete E., Waugh, Robbie; id_orcid, Russell, Joanne R., Joanne R Russell   +17 more
core   +1 more source

Application of Low Coverage Genotyping by Sequencing in Selectively Bred Arctic Charr (Salvelinus alpinus)

G3: Genes, Genomes, Genetics, 2020
Arctic charr (Salvelinus alpinus) is a species of high economic value for the aquaculture industry, and of high ecological value due to its Holarctic distribution in both marine and freshwater environments.
Christos Palaiokostas, Shannon M. Clarke, Henrik Jeuthe, Rudiger Brauning, Timothy P. Bilton, Ken G. Dodds, John C. McEwan, Dirk-Jan De Koning   +7 more
doaj   +1 more source

The power of retrotransposons in high-throughput genotyping and sequencing

Frontiers in Plant Science, 2023
The use of molecular markers has become an essential part of molecular genetics through their application in numerous fields, which includes identification of genes associated with targeted traits, operation of backcrossing programs, modern plant breeding, genetic characterization, and marker-assisted selection.
Yunus Emre Arvas, Sevgi Marakli, Yılmaz Kaya, Yılmaz Kaya, Ruslan Kalendar, Ruslan Kalendar   +5 more
openaire   +5 more sources

Spontaneous hybridization and introgression between walleye (Sander vitreus) and sauger (Sander canadensis) in two large reservoirs: Insights from genotyping by sequencing

Evolutionary Applications, 2021
Anthropogenic activities may facilitate undesirable hybridization and genomic introgression between fish species. Walleye (Sander vitreus) and sauger (Sander canadensis) are economically valuable freshwater species that can spontaneously hybridize in ...
Carly F. Graham, Rebecca L. Eberts, Una Goncin, Christopher M. Somers   +3 more
doaj   +1 more source

Adapting Genotyping-by-Sequencing and Variant Calling for Heterogeneous Stock Rats

G3: Genes, Genomes, Genetics, 2020
The heterogeneous stock (HS) is an outbred rat population derived from eight inbred rat strains. HS rats are ideally suited for genome wide association studies; however, only a few genotyping microarrays have ever been designed for rats and none of them ...
Alexander F. Gileta, Jianjun Gao, Apurva S. Chitre, Hannah V. Bimschleger, Celine L. St. Pierre, Shyam Gopalakrishnan, Abraham A. Palmer   +6 more
doaj   +1 more source

Low genome‐wide divergence between two lizard populations with high adaptive phenotypic differentiation

Ecology and Evolution, 2021
Usually, adaptive phenotypic differentiation is paralleled by genetic divergence between locally adapted populations. However, adaptation can also happen in a scenario of nonsignificant genetic divergence due to intense gene flow and/or recent ...
Alejandro Llanos‐Garrido, Javier Pérez‐Tris, José A. Díaz   +2 more
doaj   +1 more source

Optimizing ddRADseq in Non-Model Species: A Case Study in Eucalyptus dunnii Maiden

Agronomy, 2019
Restriction site-associated DNA sequencing (RADseq) and its derived protocols, such as double digest RADseq (ddRADseq), offer a flexible and highly cost-effective strategy for efficient plant genome sampling.
Natalia Cristina Aguirre, Carla Valeria Filippi, Giusi Zaina, Juan Gabriel Rivas, Cintia Vanesa Acuña, Pamela Victoria Villalba, Martín Nahuel García, Sergio González, Máximo Rivarola, María Carolina Martínez, Andrea Fabiana Puebla, Michele Morgante, Horacio Esteban Hopp, Norma Beatriz Paniego, Susana Noemí Marcucci Poltri   +14 more
doaj   +1 more source

cnvCapSeq: detecting copy number variation in long-range targeted resequencing data. [PDF]

, 2014
Targeted resequencing technologies have allowed for efficient and cost-effective detection of genomic variants in specific regions of interest. Although capture sequencing has been primarily used for investigating single nucleotide variants and indels ...
Bellos, Evangelos; https://orcid.org/, Bellos, Evangelos, Kumar, Vikrant, Cheng, C-Y, Cheng, CY, Wong, TYI, Davila, S, Bellos, E, Phua, ZYA, Maggi, Jordi; https://orcid.org/, Lin, C, Phua, Zai Yang, Coin, Lachlan J M, Coin, LJM, Hibberd, ML, Hibberd, Martin L., Wong, TY, Cheng, Ching-Yu, Gemmy Cheung, CM, Cheung, CMIG, Coin, Lachlan JM, Yang Phua, Z, Lin, Clarabelle, Maggi, Jordi, Kumar, V, Cheng, Ching Yu, Maggi, J, Hibberd, Martin L, Coin, Lachlan J.M., Cheung, Chui Ming Gemmy, Davila, Sonia, Wong, Tien Yin   +31 more
core   +1 more source

CTAB DNA Extraction and Genotyping-by-Sequencing to Map Meiotic Crossovers in Plants

, 2022
Reciprocal DNA crossovers between chromosomes form new allelic combinations and contribute to the formation of novel genetic diversity. Crossovers are formed during meiosis of germ cells and these recombination events have influenced plant genome ...
Lambing, C.
core   +1 more source

Genetic diversity and population structure analysis of barley landraces from Shanghai region using genotyping-by-sequencing [PDF]

, 2023
Barley (Hordeum vulgare L.) is an important economic crop for food, feed and industrial raw materials. In the present research, 112 barley landraces from the Shanghai region were genotyped using genotyping-by-sequencing (GBS), and the genetic diversity ...
Huihui Wang, Chen, Z., Zong, Y., Halford, N. G., Yingjie Zong, Ruiju Lu, Wang, H., Lu, R., Zhiwei Chen, Chenghong Liu, Luli Li, Guo, Z., Liu, C., Nigel G. Halford, Li, L., Zhenzhu Guo   +15 more
core   +1 more source