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Clinical Metagenomic Next-Generation Sequencing for Pathogen Detection [PDF]

open access: yesAnnual Review of Pathology: Mechanisms of Disease, 2019
Nearly all infectious agents contain DNA or RNA genomes, making sequencing an attractive approach for pathogen detection. The cost of high-throughput or next-generation sequencing has been reduced by several orders of magnitude since its advent in 2004 ...
Wei Gu, Steve Miller, Charles Y Chiu
exaly   +7 more sources

Metagenomic next-generation sequencing targeted and metagenomic next-generation sequencing for pulmonary infection in HIV-infected and non-HIV-infected individuals

open access: yesFrontiers in Cellular and Infection Microbiology
BackgroundWhen individuals infected with human immunodeficiency virus (HIV) experience pulmonary infections, they often exhibit severe symptoms and face a grim prognosis.
Luyao Sun   +6 more
doaj   +5 more sources

Application of metagenomic next-generation sequencing in cutaneous tuberculosis

open access: yesFrontiers in Cellular and Infection Microbiology, 2022
Tuberculous infection in a skin wound is a rare but well-known condition. This study describes a child infected with tuberculosis after being wounded. Because of swelling and pain in his wrist tissue, he was admitted to the Affiliated Hospital of Jining ...
Min Kong   +7 more
doaj   +3 more sources

Leishmaniasis Diagnosis via Metagenomic Next-Generation Sequencing [PDF]

open access: yesFrontiers in Cellular and Infection Microbiology, 2020
Leishmaniasis is a vector-borne disease caused by Leishmania. Although the incidence of leishmaniasis in China is currently low, it has not been completely eradicated.
Hongbin Chen   +6 more
doaj   +3 more sources

Application of metagenomic next-generation sequencing and targeted metagenomic next-generation sequencing in diagnosing pulmonary infections in immunocompetent and immunocompromised patients

open access: yesFrontiers in Cellular and Infection Microbiology
BackgroundMetagenomic next-generation sequencing (mNGS) technology has been widely used to diagnose various infections. Based on the most common pathogen profiles, targeted mNGS (tNGS) using multiplex PCR has been developed to detect pathogens with ...
Yong Liu   +5 more
doaj   +3 more sources

Application of Metagenomic Next-Generation Sequencing in Mycobacterium tuberculosis Infection

open access: yesFrontiers in Medicine, 2022
The fight against Mycobacterium tuberculosis (MTB) has been going on for thousands of years, while it still poses a threat to human health. In addition to routine detections, metagenomic next-generation sequencing (mNGS) has begun to show presence as a ...
Yaoguang Li   +7 more
doaj   +3 more sources

Pathogenic Detection by Metagenomic Next-Generation Sequencing in Osteoarticular Infections [PDF]

open access: yesFrontiers in Cellular and Infection Microbiology, 2020
Objectives: To evaluate metagenomic next-generation sequencing (mNGS) as a diagnostic tool in detecting pathogens from osteoarticular infection (OAI) samples.Methods: 130 samples of joint fluid, sonicate fluid, and tissue were prospectively collected ...
Zi-da Huang   +8 more
doaj   +3 more sources

Metagenomic next‐generation sequencing for the diagnosis of Chlamydia psittaci pneumonia

open access: yesThe Clinical Respiratory Journal, 2022
The aim of this study was to investigate the clinical characteristics of Chlamydia psittaci pneumonia and evaluate the diagnostic value of Metagenomic Next‐Generation Sequencing (mNGS).
Hu Li   +13 more
doaj   +2 more sources

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