Results 51 to 60 of about 109,383 (351)

TRF2 controls telomeric nucleosome organization in a cell cycle phase-dependent manner [PDF]

open access: yes, 2012
Mammalian telomeres stabilize chromosome ends as a result of their assembly into a peculiar form of chromatin comprising a complex of non-histone proteins named shelterin.
Bauwens, Serge   +10 more
core   +13 more sources

Statistical-mechanical lattice models for protein-DNA binding in chromatin [PDF]

open access: yes, 2010
Statistical-mechanical lattice models for protein-DNA binding are well established as a method to describe complex ligand binding equilibriums measured in vitro with purified DNA and protein components. Recently, a new field of applications has opened up
Adams C C   +24 more
core   +2 more sources

Nucleosomes inhibit target cleavage by CRISPR-Cas9 in vivo

open access: yesProceedings of the National Academy of Sciences of the United States of America, 2018
Significance The efficiency of genome editing with CRISPR-Cas9 can vary widely at different targets and in different cells. Some of this variability may be due to the inherent quality of different guide RNAs, but it may also depend on the cellular ...
R. Yarrington   +4 more
semanticscholar   +1 more source

Specialization of the chromatin remodeler RSC to mobilize partially-unwrapped nucleosomes

open access: yeseLife, 2020
SWI/SNF-family chromatin remodeling complexes, such as S. cerevisiae RSC, slide and eject nucleosomes to regulate transcription. Within nucleosomes, stiff DNA sequences confer spontaneous partial unwrapping, prompting whether and how SWI/SNF-family ...
Alisha Schlichter   +3 more
doaj   +1 more source

NETosis and Nucleosome Biomarkers in Septic Shock and Critical COVID-19 Patients: An Observational Study

open access: yesBiomolecules, 2022
Background: Neutrophil extracellular traps’ (NETs’) formation is a mechanism of defense that neutrophils deploy as an alternative to phagocytosis, to constrain the spread of microorganisms.
Laure Morimont   +14 more
doaj   +1 more source

Arginine mutation alters binding of a human monoclonal antibody to antigens linked to systemic lupus erythematosus and the antiphospholipid syndrome [PDF]

open access: yes, 2007
Objective: Previous studies have shown the importance of somatic mutations and arginine residues in the complementarity-determining regions (CDRs) of pathogenic anti-double-stranded DNA (anti-dsDNA) antibodies in human and murine lupus, and in studies of
Giles, I.   +7 more
core   +1 more source

The tardigrade damage suppressor protein binds to nucleosomes and protects DNA from hydroxyl radicals

open access: yeseLife, 2019
Tardigrades, also known as water bears, are animals that can survive extreme conditions. The tardigrade Ramazzottius varieornatus contains a unique nuclear protein termed Dsup, for damage suppressor, which can increase the resistance of human cells to ...
C. Chavez   +4 more
semanticscholar   +1 more source

Nucleosome Positioning [PDF]

open access: yesISRN Molecular Biology, 2012
Nucleosome positioning is not only related to genomic DNA compaction but also to other biological functions. After the chromatin is digested by micrococcal nuclease, nucleosomal (nucleosome-bound) DNA fragments can be sequenced and mapped on the genomic DNA sequence.
openaire   +2 more sources

DNA-encoded nucleosome occupancy is associated with transcription levels in the human malaria parasite Plasmodium falciparum. [PDF]

open access: yes, 2014
BackgroundIn eukaryotic organisms, packaging of DNA into nucleosomes controls gene expression by regulating access of the promoter to transcription factors.
Bunnik, Evelien M   +6 more
core   +3 more sources

Precise genome-wide mapping of single nucleosomes and linkers in vivo

open access: yesGenome Biology, 2018
We developed a chemical cleavage method that releases single nucleosome dyad-containing fragments, allowing us to precisely map both single nucleosomes and linkers with high accuracy genome-wide in yeast.
Răzvan V. Chereji   +3 more
semanticscholar   +1 more source

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