Results 31 to 40 of about 234,936 (321)

Length variation in short tandem repeats affects gene expression in natural populations of Arabidopsis thaliana

open access: yesThe Plant Cell, 2021
Large-scale empirical modeling and experimental work demonstrate that allelic variation in short tandem repeats across natural populations of Arabidopsis thaliana affects gene expression.
William B. Reinar   +4 more
semanticscholar   +1 more source

The mutational dynamics of short tandem repeats in large, multigenerational families

open access: yesbioRxiv, 2021
Background Short tandem repeats (STRs) compose approximately 3% of the genome, and mutations at STR loci have been linked to dozens of human diseases including amyotrophic lateral sclerosis, Friedreich ataxia, Huntington disease, and fragile X syndrome ...
Cody J. Steely   +3 more
semanticscholar   +1 more source

Genome-wide contribution of common short-tandem repeats to Parkinson's disease genetic risk

open access: yesmedRxiv, 2021
Parkinson's disease (PD) is a complex neurodegenerative disorder with a strong genetic component, where most known disease-associated variants are single nucleotide polymorphisms (SNPs) and small insertions and deletions (Indels). DNA repetitive elements
B. Bustos   +8 more
semanticscholar   +1 more source

Analysis of short tandem repeats by parallel DNA threading. [PDF]

open access: yesPLoS ONE, 2009
The majority of studies employing short tandem repeats (STRs) require investigation of several of these genetic markers. As such, we demonstrate the feasibility of the trinucleotide threading (TnT) approach for scalable analysis of STRs.
Pawel Zajac   +2 more
doaj   +1 more source

Short Tandem Repeats in plants: Genomic distribution and function prediction

open access: yesElectronic Journal of Biotechnology, 2021
Background: Short Tandem repeats (STRs) existed as popular elements in both eukaryotic and prokaryotic genomes. Results: In this study, we analyzed the characteristics, distributions, and motif features of STRs within whole-genomes of 140 plant species ...
Lin Zhu   +8 more
doaj   +1 more source

LEPStr: A database for Mycobacterium leprae short tandem repeats

open access: yesInformatics in Medicine Unlocked, 2020
Short tandem repeats are short arrays of nucleotide sequences, and they have vital roles in many biological processes, including modulation of transcription, enhancement of gene expression, adaptation to a particular environment, and link to autosomal ...
Partha Sarathi Mohanty   +9 more
doaj   +1 more source

Chromosomal Mapping of Tandem Repeats Revealed Massive Chromosomal Rearrangements and Insights Into Senna tora Dysploidy

open access: yesFrontiers in Plant Science, 2021
Tandem repeats can occupy a large portion of plant genomes and can either cause or result from chromosomal rearrangements, which are important drivers of dysploidy-mediated karyotype evolution and speciation.
Nomar Espinosa Waminal   +3 more
doaj   +1 more source

Investigation of a candidemia outbreak caused by C. parapsilosis in a pediatric hematology/oncology center [PDF]

open access: yesКлиническая микробиология и антимикробная химиотерапия, 2020
Objective. To investigate a candidemia outbreak caused by C. parapsilosis in a clinical unit of the Dmitry Rogachev National Medical Research Center of Pediatric Hematology, Oncology and Immunology (NMRC PHOI). Materials and Methods.
Kozhushnaya O.S.   +6 more
doaj   +1 more source

Properties of structural variants and short tandem repeats associated with gene expression and complex traits

open access: yesNature Communications, 2020
Structural variants (SVs) and short tandem repeats (STRs) comprise a broad group of diverse DNA variants which vastly differ in their sizes and distributions across the genome. Here, we identify genomic features of SV classes and STRs that are associated
David A. Jakubosky   +24 more
semanticscholar   +1 more source

Does biased gene conversion influence polymorphism in the circumsporozoite protein-encoding gene of Plasmodium vivax? [PDF]

open access: yes, 1988
Variation between North Korean and Latin American isolates in the circumsporozoite (CS) protein encoding gene of the human malaria parasite Plasmodium vivax was studied.
Arnot, D.E.   +2 more
core   +2 more sources

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