Results 11 to 20 of about 93,598 (304)
SSRD: simple sequence repeats database of the human genome [PDF]
Comparative and Functional Genomics, 2003 AbstractSimple sequence repeats are predominantly found in most organisms. They play a major role in studies of genetic diversity, and are useful as diagnostic markers for many diseases. The simple sequence repeats database (SSRD) for the human genome was created for easy access to such repeats, for analysis, and to be used to understand their ...
Subramanian, Subbaya +5 more
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Coevolution between simple sequence repeats (SSRs) and virus genome size
BMC Genomics, 2012 Background Relationship between the level of repetitiveness in genomic sequence and genome size has been investigated by making use of complete prokaryotic and eukaryotic genomes, but relevant studies have been rarely made in virus genomes.
Zhao Xiangyan +11 more
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Simple sequence repeats as advantageous mutators in evolution
Trends in Genetics, 2006 Simple sequence repeats (SSRs) often serve to modify genes with which they are associated. The influence of SSRs on gene regulation, transcription and protein function typically depends on the number of repeats, while mutations that add or subtract repeat units are both frequent and reversible.
Kashi, Yechezkel, King, David G
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Forest Systems, 2023 Aim of study: To characterize and compare the genetic resources and gain some insights into the evolutionary history of Aleppo pine (Pinus halepensis Mill.) and Brutia pine (Pinus brutia Ten.) species which are both distributed across more than 8 ...
Yusuf KURT +5 more
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PhytoFrontiers, 2023 Columbia root-knot nematode, Meloidogyne chitwoodi, parasitizes potato plants and causes visible small brown dots in the tuber flesh that dramatically reduce the market value of the crop. In the Pacific Northwest, two races of M.
Shengwei Hu +10 more
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Simple sequence repeats in prokaryotic genomes [PDF]
Proceedings of the National Academy of Sciences, 2007 Simple sequence repeats (SSRs) in DNA sequences are composed of tandem iterations of short oligonucleotides and may have functional and/or structural properties that distinguish them from general DNA sequences. They are variable in length because of slip-strand mutations and may also affect local structure of the DNA molecule or the ...
Jan, Mrázek +2 more
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Statistical Genomics Analysis of Simple Sequence Repeats from the Paphiopedilum Malipoense Transcriptome Reveals Control Knob Motifs Modulating Gene Expression [PDF]
Advanced ScienceYingyi Liang, Jing Hao, Yingjuan Su
exaly +2 more sources
Optimization of sequence alignment for simple sequence repeat regions [PDF]
BMC Research Notes, 2011 Microsatellites, or simple sequence repeats (SSRs), are tandemly repeated DNA sequences, including tandem copies of specific sequences no longer than six bases, that are distributed in the genome. SSR has been used as a molecular marker because it is easy to detect and is used in a range of applications, including genetic diversity, genome mapping, and
Ogbonnaya Francis C +2 more
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SSREnricher: a computational approach for large-scale identification of polymorphic microsatellites based on comparative transcriptome analysis [PDF]
PeerJ, 2020 Microsatellite (SSR) markers are the most popular markers for genetic analyses and molecular selective breeding in plants and animals. However, the currently available methods to develop SSRs are relatively time-consuming and expensive.
Wei Luo +7 more
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The complete chloroplast genome sequence of Gynostemma yixingense and comparative analysis with congeneric species [PDF]
Genetics and Molecular Biology, 2020 Gynostemma yixingense, an important medicinal member of the Cucurbitaceae family, is an endemic herbaceous species distributed in East China.
Long Wang +6 more
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