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Haploinsufficiency of Cnot3 Aggravates Acid-Induced Acute Lung Injury Likely Through Transcriptional and Post-Transcriptional Upregulation of Pro-Inflammatory Genes. [PDF]

open access: yesJ Inflamm Res
Yamaguchi T   +11 more
europepmc   +1 more source
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Multifunctional deadenylase complexes diversify mRNA control

Nature Reviews Molecular Cell Biology, 2008
Dynamic changes of the lengths of mRNA poly(A) tails are catalysed by diverse deadenylase enzymes. Modulating the length of the poly(A) tail of an mRNA is a widespread means of controlling protein production and mRNA stability. Recent insights illuminate the specialized activities, biological functions and regulation of deadenylases.
Aaron C, Goldstrohm, Marvin, Wickens
openaire   +2 more sources

Biophysical and biochemical characterization of recombinant human Pop2 deadenylase

Protein Expression and Purification, 2008
Pop2, a component of the Ccr4-Not complex, functions as a deadenylase both in vitro and in vivo. In this research, we found that the recombinant human Pop2 (hPop2) mainly existed in a compact monomeric state with a a + b tertiary structure type. The percentages of the secondary structures evaluated from the CD spectrum were about 37% a-helix, 14% b ...
Wei-Feng, Liu, Yong-Bin, Yan
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Activity and Function of Deadenylases

2012
Shortening of the poly(A) tail is the first and often rate-limiting step in mRNA degradation. Three poly(A)-specific 3' exonucleases have been described that can carry out this reaction: PAN, composed of two subunits; PARN, a homodimer; and the CCR4-NOT complex, a heterooligomer that contains two catalytic subunits and may have additional functions in ...
Christiane, Harnisch   +4 more
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PAN-orama: three convergent views of a eukaryotic deadenylase

Nature Structural & Molecular Biology, 2014
Post-transcriptional mRNA regulation is often attained by lengthening or shortening the 3′ poly(A) tail of a transcript. Eukaryotic mRNAs show a spectrum of deadenylation rates, thus allowing intricate control of gene expression, but the mechanisms that determine such rates are unclear.
Sophie, Martin, Jeff, Coller
openaire   +2 more sources

Quantitative Biochemical Analysis of Deadenylase Enzymes Using Fluorescence and Chemiluminescence-Based Assays

2023
Deadenylase enzymes play a key role in mRNA degradation and RNA processing. In this chapter, we describe two activity assays for the quantitative biochemical analysis of deadenylase enzymes, which can easily be adapted for other nuclease enzymes. The assays use distinct principles of detection, which are based on differential annealing of a probe ...
Blessing, Airhihen   +3 more
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Diverse functions of deadenylases in DNA damage response and genomic integrity

WIREs RNA, 2020
AbstractDNA damage response (DDR) is a coordinated network of diverse cellular processes including the detection, signaling, and repair of DNA lesions, the adjustment of metabolic network and cell fate determination. To deal with the unavoidable DNA damage caused by either endogenous or exogenous stresses, the cells need to reshape the gene expression ...
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Characterization of the ubiquitin binding properties of the deadenylase Pan2

The FASEB Journal, 2016
Messenger RNA (mRNA) stability plays an important role in regulating gene expression in eukaryotic cells. While a number of endo‐ and exo‐nucleolytic enzymes act on mRNA, removal of the poly(A) tail, or deadenylation, is often the first and rate‐limiting step in mRNA decay.
Zachary Swinney   +3 more
openaire   +1 more source

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