Results 111 to 120 of about 11,306,965 (261)

Overview of the P. falciparum targeted nanopore sequencing approach using Oxford Nanopore Technologies (ONT) sequencing platform with the mobile Bento Lab.

Overview of the P. falciparum targeted nanopore sequencing approach using Oxford Nanopore Technologies (ONT) sequencing platform with the mobile Bento Lab.
Mohamed Ali Ali (17889541), Daniel J. Bruzzese (6807488), Safia Mohammed Aliy (17889535), Anita Lerch (2029), Joshua Yukich (44606), Aurel Holzschuh (8376513), Mohamed Haji Ali (17889538), Manuel W. Hetzel (9773118), Bakar S. Fakih (17889532), Cristian Koepfli (191306)   +9 more
core   +1 more source

Biosurfactant production by Pseudomonas aeruginosa isolated from mining waste: From genomic analysis to development of a polymeric composite for removal of hexavalent chromium

Polymer International, EarlyView.
Biosurfactant was produced by Pseudomonas aeruginosa using andiroba waste from Amazonia. A biosurfactant–alginate composite (Alg/BioS) was successfully synthesized via ionotropic gelation, and achieved up to 70% Cr6+ removal from water. Abstract Environmental contamination by heavy metals represents a significant challenge due to their persistence in ...
Paulo Diniz Austriaco, Emilly Cruz da Silva, Glenda Sores Gomes, Joane Almeida Alves, Amanda Vidal, Leandro Argolo, Rafaela Ribeiro, Luciana Souza, José Augusto Pires Bitencourt, Leonardo Brasil Felipe, Leonie Asfora Sarubbo, Sidnei Cerqueira dos Santos   +11 more
wiley   +1 more source

NaMeco - Nanopore full-length 16S rRNA gene reads clustering and annotation

BMC Genomics
Background Nanopore sequencing is currently one of the leading third-generation sequencing technologies on the market and is gaining popularity among researchers.
Timur Yergaliyev, Bibiana Rios-Galicia, Amélia Camarinha-Silva   +2 more
doaj   +1 more source

A Method for Filtering Abnormal Modified Base Calling in Oxford Nanopore Technologies Sequencing

Journal of Bioinformatics and Systems Biology
Abstract Background gene synthesis sequencing using the long-read Oxford Nanopore Technologies (ONT) provides a cost-effective option for gene synthesis quality control. Despite the advantage of using long reads, however, accurate base calling is influenced by modified bases.
Ruikai Jia, Yusha Wang, Hua Ye, Xiaoshu Ma   +3 more
openaire   +1 more source

First genome sequence of a European Alternaria brassicae isolate and genes involved in early development of alternaria leaf spot on Brassica juncea

Pest Management Science, EarlyView.
This article reports the first genome sequence of a UK Alternaria brassicae isolate. Dual RNA‐sequencing profiling of A. brassicae‐infected Brassica juncea leaves identified differentially expressed genes involved in pathogenicity and host response pathways in moderately resistant Sej‐2 (2) and moderately susceptible Pusa Jaikisan cultivars.
Kevin M. King, Graham McLaughlin, Chinthani S. Karandeni Dewage, Zedi Gao, David J. Hughes, Jonathan S. West, Henrik U. Stotz   +6 more
wiley   +1 more source

The first report of M918L (super‐kdr) and L932F voltage‐gated sodium channel mutations in the English grain aphid (Sitobion avenae)

Pest Management Science, EarlyView.
The study has identified mutations in the voltage gated sodium channel of the English grain aphid (Sitobion avenae) at M918 and L932, which have not been previously reported in this species. Abstract BACKGROUND The grain aphid, Sitobion avenae Fabricius (Hemiptera: Aphididae), is a vector of yellow dwarf viruses and an important pest of cereals.
Virgile Ballandras, Louise McNamara, James C Carolan, Tom Ruttink, Stephen Byrne   +4 more
wiley   +1 more source

Characterization of a novel R98Q mutation that confers resistance to sulfentrazone in common ragweed (Ambrosia artemisiifolia) populations from Michigan

Pest Management Science, EarlyView.
Field‐collected Ambrosia artemisiifolia populations from Michigan, USA, soybean fields exhibited strong resistance to the protoporphyrinogen IX oxidase (PPO)‐inhibiting herbicide sulfentrazone and reduced sensitivity to fomesafen. Target‐site analysis identified a novel Arg‐98‐Gln (R98Q) substitution in PPO2, co‐occurring with the previously reported ...
Sara Álvarez‐Rodríguez, Michael Ozolins, Aimone Porri, Jens Lerchl, Eric Patterson   +4 more
wiley   +1 more source

Low Temperature Site‐Specific Pulsed Laser Annealing of MoS2

Small, EarlyView.
The application of laser pulses, of extremely short duration, is investigated as a potential new method to modify the atomic structure of ultrathin 2D materials for use in the creation of future electrical devices. The process is efficient, offering a site‐specific functionality, where regions of an electronic device that only requires annealing is ...
Nazar Farid, Aashi Gupta, Pavlina Metaxa, A Arifutzzaman, Hariprasad Kuduvan, Rahil Haria, Michele Conroy, Ian Campbell, Ageeth A Bol, James Connolly, Jun Lin, Ian Povey, Ray Duffy, Gerard M O'Connor   +13 more
wiley   +1 more source

Comparison of Illumina and Oxford Nanopore Technology systems for the genomic characterization of Streptococcus pneumoniae

Microbiology Spectrum
ABSTRACT Whole-genome sequencing (WGS) is an invaluable tool that enables high-resolution genotyping to precisely identify bacterial strains. It is particularly significant for highly pathogenic bacteria such as Streptococcus pneumoniae
Fatima Dakroub, Fata Akl, Alissar Zaghlout, Jose Rita Gerges, Nancy Hourani, Celina F. Boutros, George F. Araj, Ghassan M. Matar, Antoine Abou Fayad, Ghassan S. Dbaibo, Nada Ghosn, Nour Nahouli, Razane El Rifai, Zeina Mohsen, Rita Feghali, Tamima Jisr, Nour Zaatary, Emma Abboud, Marwan Osman, Elie Bou Raad, Hadi El Amin, Hicham Abdo, Rouba Chaker, Jacques E. Mokhbat, Mohamad El-Zaatari, Elie Salem Sokhn, Raymond Rohban, Elie Khoury, Nour Youssef, Danielle Fayad, Marc Finianos, Amena A. Rizk, Mireille Lteif, Bassam El Hafi, Mohammad Bahij Moumneh, Sera Chamseddine, Zeina El Houry, Magda Haj, Ahmad Chmaisse, Samer Bou Karroum, Zeinab El Zein, Yorgo Zehlani, Carine Hedari, Moza Hammadi, Zainab Ali, Imad Akel, Randa Saad, Sarah Hasan, Alice Recho, Mariam Saadeddine, Najwa Radwan, Christian Sadaka   +51 more
openaire   +3 more sources

immunoHuMiX: A personalizable gut‐on‐chip model for unraveling human microbiome–immune interactions

VIEW, EarlyView.
The study introduces a personalized gut model that brings together human immune cells and intestinal cells to better mimic how the body interacts with microbes. This system successfully maintained both human cells and a 17‐strain probiotic community, showing consistent immune responses across different donors.
Charlotte De Rudder, Kacy Greenhalgh, Joanna Baginska, Camille Martin‐Gallausiaux, Léa Grandmougin, Rémy Villette, Mara Lucchetti, Bérénice Hansen, Marek Ostaszewski, Viacheslav A. Petrov, Koji Atarashi, Lena Weidert, Audrey Frachet Bour, Dominik Ternes, Javier Ramiro‐Garcia, Antoine Malabirade, Takeshi Tanoue, Marc Mac Giolla Eain, Elisabeth Letellier, Matthew Barrett, Jérôme Lacombe, Frederic Zenhausern, Coralie Guérin, Markus Ollert, Carole Seguin‐Devaux, Kenya Honda, Paul Wilmes   +26 more
wiley   +1 more source