Results 11 to 20 of about 6,398,476 (257)

Diagnostic value of third-generation nanopore sequencing in extrapulmonary tuberculosis [PDF]

Frontiers in Cellular and Infection Microbiology
BackgroundThis study aimed to explore the accuracy of third-generation nanopore sequencing to diagnose extrapulmonary tuberculosis (EPTB).MethodsSamples were collected from the lesions of 67 patients with suspected EPTB admitted between April 2022 and ...
Chang Song, Chang Song, Chunyan Zhao, Chunyan Zhao, Yanrong Lin, Yingxing Nong, Aichun Huang, Shaoyong Xi, Xiaoying Wei, Chunmei Zeng, Shixiong Yang, Qingdong Zhu   +11 more
doaj   +2 more sources

Third Generation Sequencing Transforming Plant Genome Research: Current Trends and Challenges

, 2023
Supplementary dataset for the review article "Third Generation Sequencing Transforming Plant Genome Research: Current Trends and Challenges" listing out the plant genomes sequenced through First generation, Second generation, Third Generation ...
Kalita, Eeshan, Kalita, E (via Mendeley Data)   +1 more
core   +3 more sources

Third‐Generation Sequencing of Epigenetic DNA [PDF]

, 2023
The discovery of epigenetic bases has revolutionised the understanding of disease and development. Among the most studied epigenetic marks are cytosines covalently modified at the 5 position.
Bethany Searle, Andrew Kellett, Kellett, Andrew, Müller, Markus, Thomas Carell, Carell, Thomas, Markus Müller, Searle, Bethany   +7 more
core   +1 more source

Third-Generation Sequencing in Clinical Practice: The New Era of Precision Medicine? [PDF]

, 2022
In the last decades, the spreading of next-generation sequencing (NGS) in clinical practice has considerably increased the genomic knowledge of several disorders.
Cumbo C., Albano F., Minervini C. F., Cosimo Cumbo, Francesco Albano, Crescenzio Francesco Minervini   +5 more
core   +2 more sources

LongQC: A Quality Control Tool for Third Generation Sequencing Long Read Data [PDF]

, 2019
We propose LongQC as an easy and automated quality control tool for genomic datasets generated by third generation sequencing (TGS) technologies such as Oxford Nanopore technologies (ONT) and SMRT sequencing from Pacific Bioscience (PacBio).
Yoshinori Fukasawa, Carty, K., Luca Ermini, Ermini, Luca, Fukasawa, Yoshinori, Wang, H., Min-Sin Cheung, Karen Carty, Wang, Hai, Hai Wang, Cheung, M. -S., Cheung, Ming Sin, Fukasawa, Y., Ermini, L., Carty, Karen   +14 more
core   +2 more sources

Advances in Metagenomics and Its Application in Environmental Microorganisms

Frontiers in Microbiology, 2021
Metagenomics is a new approach to study microorganisms obtained from a specific environment by functional gene screening or sequencing analysis.
Lu Zhang, FengXin Chen, Zhan Zeng, Mengjiao Xu, Fangfang Sun, Liu Yang, Xiaoyue Bi, Yanjie Lin, YuanJiao Gao, HongXiao Hao, Wei Yi, Minghui Li, Minghui Li, Yao Xie, Yao Xie   +14 more
doaj   +1 more source

Computational methods for 16S metabarcoding studies using Nanopore sequencing data

Computational and Structural Biotechnology Journal, 2020
Assessment of bacterial diversity through sequencing of 16S ribosomal RNA (16S rRNA) genes has been an approach widely used in environmental microbiology, particularly since the advent of high-throughput sequencing technologies.
Andres Santos, Ronny van Aerle, Leticia Barrientos, Jaime Martinez-Urtaza   +3 more
doaj   +1 more source

Identification of double heterozygous -α4.2Ⅰ/-α4.2Ⅱ using third-generation sequencing

Hematology, 2023
Objective The 4.2 kb deletion (-α4.2/) is a common a+-thalassemia with a carrier rate, followed by the South-East Asian deletion (–SEA) and the 3.7 kb deletion (-α3.7/). There are few reports about 4.2 kb deletion sub-types.
Liang Liang, Yongjun Xiao, Weilin Guo, Tiantian Xie, Lihong Zheng, Youqiong Li   +5 more
doaj   +1 more source

Supplemental Material for Fukasawa et al., 2020

, 2020
This file is the supplementary information of the article titled "LongQC: A quality control tool for third generation sequencing long read data".Supplementary Materials and Methods, Supplementary Figures and Tables, and example plots of the software with
Yoshinori Fukasawa (7050214), Ermini, Luca, Fukasawa, Yoshinori, Luca Ermini (7050216), Wang, Hai, Hai Wang (310051), Cheung, Ming Sin, Karen Carty (7050219), Carty, Karen, Ming Sin Cheung (106343)   +9 more
core   +1 more source

Illumina and PacBio DNA sequencing data, de novo assembly and annotation of the genome of Aurantiochytrium limacinum strain CCAP_4062/1

Data in Brief, 2020
The complete genome of the thraustochytrid Aurantiochytrium limacinum strain CCAP_4062/1 was sequenced using both Illumina Novaseq 6000 and third generation sequencing technology PacBio RSII in order to obtain trustworthy assembly and annotation.
Christian Morabito, Riccardo Aiese Cigliano, Eric Maréchal, Fabrice Rébeillé, Alberto Amato   +4 more
doaj   +1 more source