Genotyping by Sequencing Advancements in Barley [PDF]
Frontiers in Plant Science, 2022 Barley is considered an ideal crop to study cereal genetics due to its close relationship with wheat and diploid ancestral genome. It plays a crucial role in reducing risks to global food security posed by climate change. Genetic variations in the traits
Nirmal Raj Rajendran +2 more
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GBS-DP: a bioinformatics pipeline for processing data coming from genotyping by sequencing [PDF]
Вавиловский журнал генетики и селекции, 2023 The development of next-generation sequencing technologies has provided new opportunities for genotyping various organisms, including plants. Genotyping by sequencing (GBS) is used to identify genetic variability more rapidly, and is more cost-effective ...
A. Y. Pronozin +2 more
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Next Generation Characterisation of Cereal Genomes for Marker Discovery [PDF]
Biology, 2013 Cereal crops form the bulk of the world’s food sources, and thus their importance cannot be understated. Crop breeding programs increasingly rely on high-resolution molecular genetic markers to accelerate the breeding process.
Paul Visendi +2 more
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Agronomy, 2021 Rapeseed is the most important oil crop used in the food and biodiesel industries. In this study, based on single nucleotide polymorphism (SNP) identified from genotyping-by-sequencing (GBS), and an association study of flowering time, crude fat and ...
Jaihyunk Ryu +11 more
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omicR: A tool to facilitate BLASTn alignments for sequence data
SoftwareX, 2021 Bioinformatics tools for the analysis of sequencing data, are becoming accessible for most scientists. Beginners who are unfamiliar to these tools can be overwhelmed when learning to handle large sequencing datasets.
Berenice Talamantes-Becerra +2 more
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Genotyping-by-sequencing of Canada’s apple biodiversity collection [PDF]
Frontiers in Genetics, 2022 Zoë Migicovsky +2 more
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Identification of quantitative trait loci controlling root and shoot traits associated with drought tolerance in a lentil (Lens culinaris Medik.) recombinant inbred line population [PDF]
, 2016 Drought is one of the major abiotic stresses limiting lentil productivity in rainfed production systems. Specific rooting patterns can be associated with drought avoidance mechanisms that can be used in lentil breeding programs.
Coyne, Clarice J +8 more
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NanoGBS: A Miniaturized Procedure for GBS Library Preparation
Frontiers in Genetics, 2020 High-throughput reduced-representation sequencing (RRS)-based genotyping methods, such as genotyping-by-sequencing (GBS), have provided attractive genotyping solutions in numerous species.
Davoud Torkamaneh +7 more
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New Genotypes and Genomic Regions for Resistance to Wheat Blast in South Asian Germplasm
Plants, 2021 Wheat blast (WB) disease, since its first identification in Bangladesh in 2016, is now an established serious threat to wheat production in South Asia. There is a need for sound knowledge about resistance sources and associated genomic regions to assist ...
Chandan Roy +10 more
doaj +1 more source
Genotyping-by-sequencing enables linkage mapping in three octoploid cultivated strawberry families [PDF]
PeerJ, 2017 Genotyping-by-sequencing (GBS) was used to survey genome-wide single-nucleotide polymorphisms (SNPs) in three biparental strawberry (Fragaria × ananassa) populations with the goal of evaluating this technique in a species with a complex octoploid genome.
Kelly J. Vining +6 more
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