Results 21 to 30 of about 165,286 (161)

Application of Low Coverage Genotyping by Sequencing in Selectively Bred Arctic Charr (Salvelinus alpinus)

open access: yesG3: Genes, Genomes, Genetics, 2020
Arctic charr (Salvelinus alpinus) is a species of high economic value for the aquaculture industry, and of high ecological value due to its Holarctic distribution in both marine and freshwater environments.
Christos Palaiokostas   +7 more
doaj   +1 more source

Spontaneous hybridization and introgression between walleye (Sander vitreus) and sauger (Sander canadensis) in two large reservoirs: Insights from genotyping by sequencing

open access: yesEvolutionary Applications, 2021
Anthropogenic activities may facilitate undesirable hybridization and genomic introgression between fish species. Walleye (Sander vitreus) and sauger (Sander canadensis) are economically valuable freshwater species that can spontaneously hybridize in ...
Carly F. Graham   +3 more
doaj   +1 more source

Haplotag: Software for Haplotype-Based Genotyping-by-Sequencing Analysis [PDF]

open access: yesG3 Genes|Genomes|Genetics, 2015
Abstract Genotyping-by-sequencing (GBS), and related methods, are based on high-throughput short-read sequencing of genomic complexity reductions followed by discovery of single nucleotide polymorphisms (SNPs) within sequence tags. This provides a powerful and economical approach to whole-genome genotyping, facilitating applications ...
Tinker, Nicholas A   +2 more
openaire   +3 more sources

Low genome‐wide divergence between two lizard populations with high adaptive phenotypic differentiation

open access: yesEcology and Evolution, 2021
Usually, adaptive phenotypic differentiation is paralleled by genetic divergence between locally adapted populations. However, adaptation can also happen in a scenario of nonsignificant genetic divergence due to intense gene flow and/or recent ...
Alejandro Llanos‐Garrido   +2 more
doaj   +1 more source

Optimizing ddRADseq in Non-Model Species: A Case Study in Eucalyptus dunnii Maiden

open access: yesAgronomy, 2019
Restriction site-associated DNA sequencing (RADseq) and its derived protocols, such as double digest RADseq (ddRADseq), offer a flexible and highly cost-effective strategy for efficient plant genome sampling.
Natalia Cristina Aguirre   +14 more
doaj   +1 more source

Genomic Prediction in Tetraploid Ryegrass Using Allele Frequencies Based on Genotyping by Sequencing

open access: yesFrontiers in Plant Science, 2018
Perennial ryegrass is an outbreeding forage species and is one of the most widely used forage grasses in temperate regions. The aim of this study was to investigate the possibility of implementing genomic prediction in tetraploid perennial ryegrass, to ...
Xiangyu Guo   +7 more
doaj   +1 more source

Genotyping-by-sequencing and genomic selection applications in hexaploid triticale [PDF]

open access: yesG3 Genes|Genomes|Genetics, 2021
Abstract Triticale, a hybrid species between wheat and rye, is one of the newest additions to the plant kingdom with a very short history of improvement. It has very limited genomic resources because of its large and complex genome. Objectives of this study were to generate dense marker data, understand genetic diversity, population ...
Habtamu Ayalew   +7 more
openaire   +2 more sources

Construction of relatedness matrices using genotyping-by-sequencing data [PDF]

open access: yesBMC Genomics, 2015
AbstractBackgroundGenotyping-by-sequencing (GBS) is becoming an attractive alternative to array-based methods for genotyping individuals for a large number of single nucleotide polymorphisms (SNPs). Costs can be lowered by reducing the mean sequencing depth, but this results in genotype calls of lower quality.
Dodds, Ken G   +6 more
openaire   +2 more sources

Trait Analysis in Domestic Rabbits (Oryctolagus cuniculus f. domesticus) Using SNP Markers from Genotyping-by-Sequencing Data

open access: yesAnimals, 2022
The domestic rabbit (Oryctolagus cuniculus f. domesticus) is a very important variety in biomedical research and agricultural animal breeding.
Congyan Li   +15 more
doaj   +1 more source

Detection of Hub QTLs Underlying the Genetic Basis of Three Modules Covering Nine Agronomic Traits in an F2 Soybean Population

open access: yesAgronomy, 2022
Deciphering the genetic basis underlying agronomic traits is of importance for soybean improvement. However, covariation, modulated by genetic correlations between complicated traits via hub QTLs, commonly affects the efficiency and accuracy of soybean ...
Mengmeng Fu   +8 more
doaj   +1 more source

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