Results 41 to 50 of about 5,800,592 (273)

Absence of evidence is not evidence of absence: Nanopore sequencing and complete assembly of the European lobster (Homarus gammarus) mitogenome uncovers the missing nad2 and a new major gene cluster duplication

open access: yesBMC Genomics, 2019
Background The recently published complete mitogenome of the European lobster (Homarus gammarus) that was generated using long-range PCR exhibits unusual gene composition (missing nad2) and gene rearrangements among decapod crustaceans with strong ...
Han Ming Gan   +3 more
doaj   +1 more source

Application of Oxford Nanopore sequencing for the study of marine biodiversity

open access: yes, 2023
reservedIl sequenziamento Oxford Nanopore ha permesso negli ultimi anni di migliorare le analisi metagenomiche, rendendo possibile l’identificazione di informazioni genetiche rilevanti dove le short reads avevano precedentemente fallito. In questo studio
CALLEGARO, ANDREA
core  

The Collection of Zoosporic Eufungi at the University of Michigan (CZEUM): introducing a new repository of barcoded Chytridiomyceta and Blastocladiomycota cultures

open access: yesIMA Fungus, 2020
We formed the Collection of Zoosporic Eufungi at the University of Michigan (CZEUM) in 2018 as a cryopreserved fungal collection consolidating the University of Maine Culture Collection (UMCC, or JEL), the University of Alabama Chytrid Culture Collection
D. Rabern Simmons   +10 more
doaj   +1 more source

Benchmarking methylation-calling tools for Oxford Nanopore Sequencing

open access: yes, 2021
Benchmarking methylation-calling tools for Oxford Nanopore ...
Yang Liu
core   +1 more source

Oxford Nanopore Technologies sequencing analysis pipeline.

open access: yes, 2021
Flowchart shows each step taken to generate recombinant sequences from Oxford Nanopore sequencing data. Boxes represent processes in the pipeline, diamonds represent decision points and ovals represent termination points. (TIF)
David J. Evans (208308)   +5 more
core   +1 more source

Chromosomal-level genome assembly of potato tuberworm, Phthorimaea operculella: a pest of solanaceous crops

open access: yesScientific Data, 2022
Measurement(s) whole genome sequencing Technology Type(s) Illumina NovaSeq. 6000 • Oxford Nanopore Sequencing Sample Characteristic - Organism Phthorimaea operculella Sample Characteristic - Location Yunnan Province, Southwest ...
Mengdi Zhang   +11 more
doaj   +1 more source

MagmaFlow: A desktop platform for artificial intelligence‐driven expression analysis

open access: yesFEBS Open Bio, EarlyView.
MagmaFlow is a free, no‐code platform for gene expression analysis. It generates interactive volcano plots, links genes to literature, pathways, and diseases, prioritizes candidates using millions of publications, identifies affected biological processes, builds network diagrams, and exports publication‐ready figures and reports for macOS and Windows ...
Carlos E. Buss   +7 more
wiley   +1 more source

High resolution long-read telomere sequencing reveals dynamic mechanisms in aging and cancer

open access: yesNature Communications
Telomeres are the protective nucleoprotein structures at the end of linear eukaryotic chromosomes. Telomeres’ repetitive nature and length have traditionally challenged the precise assessment of the composition and length of individual human telomeres ...
Tobias T. Schmidt   +10 more
doaj   +1 more source

Oxford Nanopore sequencing and library construction v1 [PDF]

open access: yes, 2021
The humpback puffer,Tetraodon palembangensis, is a species of poisonous freshwater pufferfish mainly distributed in Southeast Asia (Thailand, Laos, Malaysia and Indonesia). The humpback puffer has many interesting biological features, such as inactivity, tetrodotoxin production and body expansion.
openaire   +3 more sources

Identification and characterisation of calcitonin receptor isoforms expressed in glioblastoma derived glioma stem and U‐87 MG cells

open access: yesFEBS Open Bio, EarlyView.
Glioblastoma cells express calcitonin receptor variants (CT receptor isoforms) that may help them survive stress. Using qPCR, transcript‐specific long‐read nanopore sequencing, immunofluorescence co‐localisation and comparative sequence analysis, this study identifies a novel alternatively spliced CALCR transcript that encodes the CTb receptor isoform ...
Pragya Gupta   +7 more
wiley   +1 more source

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