Results 11 to 20 of about 12,118 (162)

ACAN Gene VNTR Polymorphism and Intervertebral Disc Degeneration in a Turkish Population

Haseki Tıp Bülteni, 2020
Aim:Intervertebral disc degeneration (IVDD) is caused by several genetic and environmental factors. Aggrecan is the major component of intervertebral disk matrix proteoglycan with multiple functional domains.
Tuba Öz, İsmail Kaya, Ayşe Feyda Nursal, Hasan Emre Aydın, Osman Demir, Serbülent Yiğit   +5 more
doaj   +1 more source

New Genetic Markers for Molecular Typing of Bacillus anthracis Strains

Проблемы особо опасных инфекций, 2019
Objective: Identification of new markers for the molecular typing of Bacillus anthracis. Materials and methods. The genomes of 16 B. anthracis strains from the collection of the Stavropol Research Anti-Plague Institute, 11 B.
E. I. Eremenko, A. G. Ryazanova, S. V. Pisarenko, N. P. Buravtseva, G. A. Pechkovsky, L. Yu. Aksenova, O. V. Semenova, N. G. Varfolomeeva, T. M. Golovinskaya, D. K. Chmerenko, D. A. Kovalev, A. M. Zhirov, N. A. Shapakov, A. N. Kulichenko   +13 more
doaj   +1 more source

The Role of Interleukin-4 VNTR Polymorphism in Dysmenorrhea Development

Haseki Tıp Bülteni, 2020
Aim:Primary dysmenorrhea (PD) is among the most common gynecological diseases in young women presenting to emergency department. It has been shown that cytokines played roles in PD pathogenesis.
Mehmet Esen, Ayşe Feyda Nursal, Esra Duman, Serbülent Yiğit   +3 more
doaj   +1 more source

Analysis of Vibrio cholerae Genotype Stability at Low Temperature and Nutrients Deficiency

Проблемы особо опасных инфекций, 2016
Objective is an experimental study of the low temperature and nutrient deficiency effects on the stability of Vibrio cholerae El Tor genetic loci complex.Materials and methods. The stability of the genetic loci (i.e. the basic pathogenicity genes; genome
L. V. Mironova, Zh. Yu. Khunkheeva, E. A. Basov, A. S. Ponomareva, S. K. Mitkeeva, S. V. Balakhonov   +5 more
doaj   +1 more source

A polymorphic transcriptional regulatory domain in the amyotrophic lateral sclerosis risk gene CFAP410 correlates with differential isoform expression

Frontiers in Molecular Neuroscience, 2022
We describe the characterisation of a variable number tandem repeat (VNTR) domain within intron 1 of the amyotrophic lateral sclerosis (ALS) risk gene CFAP410 (Cilia and flagella associated protein 410) (previously known as C21orf2), providing insight ...
Jack N. G. Marshall, Alexander Fröhlich, Li Li, Li Li, Abigail L. Pfaff, Abigail L. Pfaff, Ben Middlehurst, Thomas P. Spargo, Thomas P. Spargo, Thomas P. Spargo, Alfredo Iacoangeli, Alfredo Iacoangeli, Alfredo Iacoangeli, Bing Lang, Ammar Al-Chalabi, Ammar Al-Chalabi, Sulev Koks, Sulev Koks, Vivien J. Bubb, John P. Quinn   +19 more
doaj   +1 more source

MOLECULAR CHARACTERIZATION OF MYCOBACTERIUM TUBERCULOSIS STRAINS CIRCULATING IN THE URAL REGION, RUSSIA

Инфекция и иммунитет, 2014
. Overall 178 Mycobacterium tuberculosis isolates recovered in 2009–2011 from newly diagnosed epidemiologically unlinked to TB patients in the Ural region of Russia have been studied.
T. V. Umpeleva, M. A. Kravchenko, N. I. Eremeeva, A. A. Vyazovaya, O. V. Narvskaya   +4 more
doaj   +1 more source

trfermikit: a tool to discover VNTR-associated deletions [PDF]

Bioinformatics, 2021
AbstractSummaryWe present trfermikit, a software tool designed to detect deletions larger than 50 bp occurring in Variable Number Tandem Repeats using Illumina DNA sequencing reads. In such regions, it achieves a better tradeoff between sensitivity and false discovery than a state-of-the-art structural variation caller, Manta and complements it by ...
Peter McHale, Aaron R. Quinlan
openaire   +2 more sources

The shortcut of mycobacterial interspersed repetitive unit-variable number tandem repeat typing for Mycobacterium tuberculosis differentiation

Frontiers in Microbiology, 2022
The 24-loci mycobacterial interspersed repetitive unit-variable number tandem repeat (MIRU-VNTR) genotyping has been used as an international standard method for Mycobacterium tuberculosis (Mtb) genotyping. However, different optimized VNTR loci sets for
Shima Hadifar, Shima Hadifar, Mansour Kargarpour Kamakoli, Mansour Kargarpour Kamakoli, Sana Eybpoosh, Mehran Nakhaeizadeh, Mehran Nakhaeizadeh, Mohammad Ali Kargarpour Kamakoli, Nasim Ebrahimifard, Nasim Ebrahimifard, Abolfazl Fateh, Abolfazl Fateh, Seyed Davar Siadat, Seyed Davar Siadat, Farzam Vaziri, Farzam Vaziri   +15 more
doaj   +1 more source

Development of VNTR-Based Test System for V. cholerae Typing

Проблемы особо опасных инфекций, 2011
Analysis of VNTRs was used for typing of V. cholerae strains deposited in microbial culture collection of 48 Central Research Institute. The most informative loci and flanking primers were chosen, VNTR profiles were compiled, and allele variability ...
Ya. A. Kibirev, I. V. Darmov, M. A. Loginova, I. V. Marakulin, D. A. Chukhlantsev, T. I. Dormidontova, S. L. Kuznetsov, A. V. Kuznetsovskii   +7 more
doaj   +1 more source

Comparison between RFLP and MIRU-VNTR genotyping of Mycobacterium tuberculosis strains isolated in Stockholm 2009 to 2011. [PDF]

PLoS ONE, 2014
Our aim was to analyze the difference between methods for genotyping of Mycobacterium tuberculosis complex isolates. We collected genotyping results from Restriction Fragment Length Polymorphism (RFLP) and Mycobacterial Interspersed Repetitive Units ...
Jerker Jonsson, Sven Hoffner, Ingela Berggren, Judith Bruchfeld, Solomon Ghebremichael, Alexandra Pennhag, Ramona Groenheit   +6 more
doaj   +1 more source